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1

Sampling-Based Methods for Motion Planning with Constraints

Kingston, Zachary, Moll, Mark, Kavraki, Lydia E.

Journal:

Annual Review of Control, Robotics, and Autonomous Systems

Year:

2018

Language:

english

File:

PDF, 2.86 MB

english, 2018

2

Sampling-based robot motion planning: Towards realistic applications

Konstantinos I. Tsianos, Ioan A. Sucan, Lydia E. Kavraki

Journal:

Computer Science Review

Year:

2007

Language:

english

File:

PDF, 631 KB

english, 2007

3

Big Data on Robotics

Bohg, Jeannette, Ciocarlie, Matei, Civera, Javier, Kavraki, Lydia E.

Journal:

Year:

2016

Language:

english

File:

PDF, 53 KB

english, 2016

4

Computational Models of Protein Kinematics and Dynamics: Beyond Simulation

Gipson, Bryant, Hsu, David, Kavraki, Lydia E., Latombe, Jean-Claude

Journal:

Annual Review of Analytical Chemistry

Year:

2012

Language:

english

File:

PDF, 415 KB

english, 2012

5

[American Institute of Aeronautics and Astronautics AIAA Guidance, Navigation, and Control Conference and Exhibit - Austin, Texas ()] AIAA Guidance, Navigation, and Control Conference and Exhibit - Spacecraft Rendezvous and Docking with Real-Time, Randomized Optimization

Phillips, Jeff, Kavraki, Lydia, Bedrossian, Nazareth

Year:

2003

Language:

english

File:

PDF, 2.63 MB

english, 2003

6

DINC: A new AutoDock-based protocol for docking large ligands

Dhanik, Ankur, McMurray, John S, Kavraki, Lydia E

Journal:

BMC Structural Biology

Year:

2013

Language:

english

File:

PDF, 1.91 MB

english, 2013

7

Software for project-based learning of robot motion planning

Moll, Mark, Bordeaux, Janice, Kavraki, Lydia E.

Journal:

Computer Science Education

Year:

2013

Language:

english

File:

PDF, 564 KB

english, 2013

8

[IEEE 2010 IEEE International Conference on Robotics and Automation (ICRA 2010) - Anchorage, AK (2010.05.3-2010.05.7)] 2010 IEEE International Conference on Robotics and Automation - Sampling-based motion planning with temporal goals

Bhatia, Amit, Kavraki, Lydia E, Vardi, Moshe Y

Year:

2010

Language:

english

File:

PDF, 1.63 MB

english, 2010

9

Targeting the Src homology 2 (SH2) domain of signal transducer and activator of transcription 6 (STAT6) with cell-permeable, phosphatase-stable phosphopeptide mimics potently inhibits Tyr641 phosphorylation and transcriptional activity

Mandal, Pijus K, Morlacchi, Pietro, Knight, John Morgan, Link, Todd M, Lee, Gilbert R., Nurieva, Roza, Singh, Divyendu, Dhanik, Ankur, Kavraki, Lydia E., Corry, David B., Ladbury, John E., McMurray, J

Journal:

Journal of Medicinal Chemistry

Year:

2015

Language:

english

File:

PDF, 1.50 MB

english, 2015

10

Call for Papers: Special Issue on Big Data in Robotics

Bohg, Jeannette, Ciocarlie, Matei, Civera, Javier, Kavraki, Lydia E.

Journal:

Year:

2016

Language:

english

File:

PDF, 41 KB

english, 2016

11

[ASME ASME 2008 Dynamic Systems and Control Conference - Ann Arbor, Michigan, USA (October 20–22, 2008)] ASME 2008 Dynamic Systems and Control Conference, Parts A and B - Reconfiguration for Modular Robots Using Kinodynamic Motion Planning

Şucan, Ioan A., Kruse, Jonathan F., Yim, Mark, Kavraki, Lydia E.

Year:

2008

Language:

english

File:

PDF, 99 KB

english, 2008

12

Unix Philosophy and the Real World: Control Software for Humanoid Robots

Dantam, Neil T., Bøndergaard, Kim, Johansson, Mattias A., Furuholm, Tobias, Kavraki, Lydia E.

Journal:

Frontiers in Robotics and AI

Year:

2016

Language:

english

File:

PDF, 435 KB

english, 2016

13

Guest Editorial: Special Issue on the 2016 Workshop on the Algorithmic Foundations of Robotics (WAFR)

Bekris, Kostas, Kavraki, Lydia E

Journal:

Internatinal Journal of Robotics Research

Year:

2019

Language:

english

File:

PDF, 92 KB

english, 2019

14

Learning Feasibility for Task and Motion Planning in Tabletop Environments

Wells, Andrew M., Dantam, Neil T., Shrivastava, Anshumali, Kavraki, Lydia E.

Journal:

IEEE Robotics and Automation Letters

Year:

2019

Language:

english

File:

PDF, 9 KB

english, 2019

15

[IEEE 2019 International Conference on Robotics and Automation (ICRA) - Montreal, QC, Canada (2019.5.20-2019.5.24)] 2019 International Conference on Robotics and Automation (ICRA) - Using Local Experiences for Global Motion Planning

Chamzas, Constantinos, Shrivastava, Anshumali, Kavraki, Lydia E.

Year:

2019

Language:

english

File:

PDF, 2.93 MB

english, 2019

16

[IEEE 2019 International Conference on Robotics and Automation (ICRA) - Montreal, QC, Canada (2019.5.20-2019.5.24)] 2019 International Conference on Robotics and Automation (ICRA) - Efficient Symbolic Reactive Synthesis for Finite-Horizon Tasks

He, Keliang, Wells, Andrew M., Kavraki, Lydia E., Vardi, Moshe Y.

Year:

2019

Language:

english

File:

PDF, 175 KB

english, 2019

17

A robotics-inspired screening algorithm for molecular caging prediction

Kravchenko, Oleksandr, Varava, Anastasiia, Pokorny, Florian T., Devaurs, Didier, Kavraki, Lydia E., Kragic, Danica

Journal:

Journal of Chemical Information and Modeling

Year:

2020

File:

PDF, 8.59 MB

2020

18

A randomized kinematics-based approach to pharmacophore-constrained conformational search and database screening

LaValle, Steven M., Finn, Paul W., Kavraki, Lydia E., Latombe, Jean-Claude

Journal:

Journal of Computational Chemistry

Year:

2000

Language:

english

File:

PDF, 1.75 MB

english, 2000

19

ChemInform Abstract: A New Method for Fast and Accurate Derivation of Molecular Conformations.

Ming Zhang, Lydia E. Kavraki

Journal:

Year:

2002

File:

PDF, 24 KB

2002

20

Randomized Query Processing in Robot Path Planning

Lydia E. Kavraki, Jean-Claude Latombe, Rajeev Motwani, Prabhakar Raghavan

Journal:

Journal of Computer and System Sciences

Year:

1998

Language:

english

File:

PDF, 532 KB

english, 1998

21

On the complexity of assembly partitioning

Lydia Kavraki, Jean-Claude Latombe, Randall H. Wilson

Journal:

Information Processing Letters

Year:

1993

Language:

english

File:

PDF, 732 KB

english, 1993

22

Partitioning a planar assembly into two connected parts is NP-complete

Lydia E. Kavraki, Mihail N. Kolountzakis

Journal:

Information Processing Letters

Year:

1995

Language:

english

File:

PDF, 580 KB

english, 1995

23

Distributed computation of the knn graph for large high-dimensional point sets

Erion Plaku, Lydia E. Kavraki

Journal:

Journal of Parallel and Distributed Computing

Year:

2007

Language:

english

File:

PDF, 446 KB

english, 2007

24

Tracing conformational changes in proteins

Nurit Haspel, Mark Moll, Matthew L Baker, Wah Chiu, Lydia E Kavraki

Journal:

BMC Structural Biology

Year:

2010

Language:

english

File:

PDF, 1.46 MB

english, 2010

25

Modeling protein conformational ensembles: From missing loops to equilibrium fluctuations

Amarda Shehu, Cecilia Clementi, Lydia E. Kavraki

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 749 KB

english, 2006

26

Fast and reliable analysis of molecular motion using proximity relations and dimensionality reduction

Erion Plaku, Hernán Stamati, Cecilia Clementi, Lydia E. Kavraki

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.20 MB

english, 2007

27

From coarse-grain to all-atom: Toward multiscale analysis of protein landscapes

Allison P. Heath, Lydia E. Kavraki, Cecilia Clementi

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 987 KB

english, 2007

28

Multiscale characterization of protein conformational ensembles

Amarda Shehu, Lydia E. Kavraki, Cecilia Clementi

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2009

Language:

english

File:

PDF, 898 KB

english, 2009

29

Application of nonlinear dimensionality reduction to characterize the conformational landscape of small peptides

Hernán Stamati, Cecilia Clementi, Lydia E. Kavraki

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 2.05 MB

english, 2010

30

Multi-scale characterization of the energy landscape of proteins with application to the C3D/Efb-C complex

Nurit Haspel, Brian V. Geisbrecht, John Lambris, Lydia Kavraki

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 567 KB

english, 2010

31

Sampling Conformation Space to Model Equilibrium Fluctuations in Proteins

Amarda Shehu, Cecilia Clementi, Lydia E. Kavraki

Journal:

Year:

2007

Language:

english

File:

PDF, 1.76 MB

english, 2007

32

Robot Homing by Exploiting Panoramic Vision

Antonis A. Argyros, Kostas E. Bekris, Stelios C. Orphanoudakis, Lydia E. Kavraki

Journal:

Autonomous Robots

Year:

2005

Language:

english

File:

PDF, 866 KB

english, 2005

33

Hybrid systems: from verification to falsification by

Erion Plaku, Lydia E. Kavraki, Moshe Y. Vardi

Journal:

Formal Methods in System Design

Year:

2009

Language:

english

File:

PDF, 980 KB

english, 2009

34

Safe and Distributed Kinodynamic Replanning for Vehicular Networks

Kostas E. Bekris, Konstantinos I. Tsianos, Lydia E. Kavraki

Journal:

Mobile Networks and Applications

Year:

2009

Language:

english

File:

PDF, 908 KB

english, 2009

35

Robotics-Based Location Sensing Using Wireless Ethernet

Andrew M. Ladd, Kostas E. Bekris, Algis Rudys, Lydia E. Kavraki, Dan S. Wallach

Journal:

Wireless Networks

Year:

2005

Language:

english

File:

PDF, 736 KB

english, 2005

36

Computational challenges in systems biology

Allison P. Heath, Lydia E. Kavraki

Journal:

Computer Science Review

Year:

2009

Language:

english

File:

PDF, 5.45 MB

english, 2009

37

Recurrent use of evolutionary importance for functional annotation of proteins based on local structural similarity

David M. Kristensen, Brian Y. Chen, Viacheslav Y. Fofanov, R. Matthew Ward, Andreas Martin Lisewski, Marek Kimmel, Lydia E. Kavraki, Olivier Lichtarge

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 402 KB

english, 2006

38

Unfolding the fold of cyclic cysteine-rich peptides

Amarda Shehu, Lydia E. Kavraki, Cecilia Clementi

Journal:

Protein Science

Year:

2008

Language:

english

File:

PDF, 808 KB

english, 2008

39

Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction

Drew H Bryant, Mark Moll, Brian Y Chen, Viacheslav Y Fofanov, Lydia E Kavraki

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 1.91 MB

english, 2010

40

Prediction of enzyme function based on 3D templates of evolutionarily important amino acids

David M Kristensen, R Matthew Ward, Andreas Martin Lisewski, Serkan Erdin, Brian Y Chen, Viacheslav Y Fofanov, Marek Kimmel, Lydia E Kavraki, Olivier Lichtarge

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 2.11 MB

english, 2008

41

Novel insights into target specificities and molecular mechanisms for two potent complement evasion proteins from Staphylococcus aureus

Daniel Ricklin, Salome K. Ricklin-Lichtsteiner, Georgia Sfyroera, Hui Chen, Apostolia Tzekou, Paola Magotti, You-Qiang Wu, Brandon L. Garcia, W. Joseph McWorther, Nurit Haspel, Lydia E. Kavraki, Brian

Journal:

Molecular Immunology

Year:

2008

Language:

english

File:

PDF, 88 KB

english, 2008

42

An Accurate, Sensitive, and Scalable Method to Identify Functional Sites in Protein Structures

Hui Yao, David M. Kristensen, Ivana Mihalek, Mathew E. Sowa, Chad Shaw, Marek Kimmel, Lydia Kavraki, Olivier Lichtarge

Journal:

Journal of Molecular Biology

Year:

2003

Language:

english

File:

PDF, 927 KB

english, 2003

43

On the conformational flexibility of C3b: A molecular insight into activation and transformation of a major complement effector

Bryant Gipson, Mark Moll, Daniel Ricklin, John D. Lambris, Lydia E. Kavraki

Journal:

Year:

2012

Language:

english

File:

PDF, 69 KB

english, 2012

44

The LabelHash algorithm for substructure matching

Mark Moll, Drew H Bryant, Lydia E Kavraki

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 1.77 MB

english, 2010

45

Electrostatic contributions drive the interaction between Staphylococcus aureus protein Efb-C and its complement target C3d

Nurit Haspel, Daniel Ricklin, Brian V. Geisbrecht, Lydia E. Kavraki, John D. Lambris

Journal:

Protein Science

Year:

2008

Language:

english

File:

PDF, 728 KB

english, 2008

46

On the Characterization of Protein Native State Ensembles

Shehu, Amarda, Kavraki, Lydia E., Clementi, Cecilia

Journal:

Biophysical Journal

Year:

2007

Language:

english

File:

PDF, 767 KB

english, 2007

47

[IEEE 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW) - Philadelphia, USA (2012.10.4-2012.10.7)] 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops - Auto dock-based incremental docking protocol to improve docking of large ligands

Dhanik, Ankur, McMurray, John S, Kavraki, Lydia

Year:

2012

Language:

english

File:

PDF, 1.39 MB

english, 2012

48

Falsification of LTL safety properties in hybrid systems

Erion Plaku, Lydia E. Kavraki, Moshe Y. Vardi

Journal:

International Journal on Software Tools for Technology Transfer (STTT)

Year:

2013

Language:

english

File:

PDF, 476 KB

english, 2013

49

[IEEE 2009 IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS 2009) - St. Louis, MO, USA (2009.10.10-2009.10.15)] 2009 IEEE/RSJ International Conference on Intelligent Robots and Systems - Real-time perception-guided motion planning for a personal robot

Rusu, Radu Bogdan, Sucan, Ioan Alex, Gerkey, Brian, Chitta, Sachin, Beetz, Michael, Kavraki, Lydia E.

Year:

2009

Language:

english

File:

PDF, 1.76 MB

english, 2009

50

[IEEE 2011 IEEE Workshop on Advanced Robotics and its Social Impacts (ARSO) - Menlo Park, CA, USA (2011.10.2-2011.10.4)] Advanced Robotics and its Social Impacts - Teaching motion planning concepts to undergraduate students

Moll, Mark, Sucan, Ioan A., Bordeaux, Janice, Kavraki, Lydia E.

Year:

2011

Language:

english

File:

PDF, 1.84 MB

english, 2011